PPDB

The Plant Proteome Database

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AT1G52590.1   Putative thiol-disulfide oxidoreductase DCC

Lab Annot. unknown protein (DUF393) - new PG protein (van wijk lab 2017)
Mapman: 35.2 not assigned.unknown
Curated Location plastoglobules
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G24095.1 11Arabidopsis thaliana3E-2015932540 (0)M
AT1G24095.2 11Arabidopsis thaliana6E-2011837610 (0)_
Os01g07800.2 7Oryza sativa1E-6713871831 (1)C
Os01g07800.1 7Oryza sativa4E-5311172812 (2)C
Os06g13010.1 7Oryza sativa1E-1911837600 (0)M
Zm00001eb122820_P001 agpv5Zea mays2E-6815466820 (0)C
GRMZM2G054387_P01 3.21Zea mays2E-68154668210 (10)C
v1_GRMZM2G054387_P01 4a53Zea mays2E-6815466828 (8)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF393(1)
TargetP: Chloroplast (Class 5 C0.608; M0.548; S0.022; _0.032)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 172 aa (-cTP 147)
Molecular Weight 19.71 kDA(-cTP 16.98)
PI 9.30(-cTP 7.92)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1650Detail       leaf [A. thaliana] plastoglobules plastoglobulem48
1651Detail       leaf [A. thaliana] plastoglobules plastoglobulewild-type
2007Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

16414959(plastoglubular)
18463617(suspension cells-phosphorylated proteins)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help