PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G52560.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP 26.5 - Class MII
Mapman: 20.2.1 stress.abiotic.heat
Curated Location mitochondria (Pubmed: 18369739 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52560.2 11Arabidopsis thaliana7E-16723296960 (0)M
AT4G27670.1 11Arabidopsis thaliana7E-2313537607 (7)C
AT1G53540.1 11Arabidopsis thaliana3E-1310535603 (3)_
Os02g10710.1 7Oryza sativa2E-2621430510 (0)M
Os03g14180.1 7Oryza sativa2E-2023930500 (0)M
Os05g23140.1 7Oryza sativa7E-1710437590 (0)C
Zm00001eb235800_P001 agpv5Zea mays3E-2817837570 (0)M
GRMZM5G803365_P01 3.21Zea mays3E-2817837570 (0)M
Zm00001eb010530_P001 agpv5Zea mays1E-1720629500 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) DUF4097(1) FKBP26_C(2) HSP20(1)
TargetP: Mitochondria (Class 2 C0.133; M0.930; S0.009; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 232 aa (-cTP 190)
Molecular Weight 26.54 kDA(-cTP )
PI 6.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help