PPDB

The Plant Proteome Database

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AT1G52550.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15780.1 11Arabidopsis thaliana7E-1511546650 (0)C
Os01g29740.1 7Oryza sativa4E-074447650 (0)C
v1_GRMZM2G428356_P01 4a53Zea mays2E-074452630 (0)C
Zm00001eb221290_P001 agpv5Zea mays2E-074452630 (0)C
GRMZM2G428356_P01 3.21Zea mays2E-074452630 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 1 C0.955; M0.122; S0.009; _0.021)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 131 aa (-cTP 77)
Molecular Weight 14.23 kDA(-cTP 8.21)
PI 11.59(-cTP 11.13)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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