PPDB

The Plant Proteome Database

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AT1G52490.1   F-box/associated interaction domain protein

Lab Annot. F-box domain, cyclin-like
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52495.1 11Arabidopsis thaliana5E-6318357730 (0)_
AT5G50220.1 11Arabidopsis thaliana1E-3419044600 (0)_
AT1G32420.1 11Arabidopsis thaliana4E-3024235490 (0)C
GRMZM2G015349_P01 3.21Zea mays5E-0613630410 (0)M
Zm00001eb312790_P001 agpv5Zea mays5E-0613630410 (0)M
v1_GRMZM2G015349_P01 4a53Zea mays5E-0613630410 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(2)
TargetP: Cytoplasm (Class 1 C0.039; M0.129; S0.009; _0.965)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 211 aa (-cTP 172)
Molecular Weight 24.35 kDA(-cTP )
PI 8.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help