|
AT1G52380.1
NUP50 (Nucleoporin 50 kDa) protein
|
| Lab Annot. |
Nucleoporin Nup50a
Mapman: 29.3.1 protein.targeting.nucleus |
| Curated Location |
nucleus (Pubmed: 21189294 )
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
NUP50(2) Ran_BP1(1) |
| TargetP: |
Cytoplasm (Class 2 C0.113; M0.050; S0.023; _0.908) |
| Predotar: |
|
| Subcel. Location: |
|
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
440 aa (-cTP 377) |
| Molecular Weight |
46.59 kDA(-cTP ) |
| PI |
4.81(-cTP ) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1494 | Detail | | | | | | | | leaf [A. thaliana] | | |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
|
|
Comparative Proteomics Data
|
|
