PPDB

 The Plant Proteome Database

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AT1G52290.1   Protein kinase superfamily protein
Lab Annot.
Mapman: 30.2.22 signalling.receptor kinases.proline extensin like
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52290.2 11Arabidopsis thaliana036398990 (0)C
AT3G24550.1 11Arabidopsis thaliana038267817 (7)C
AT2G18470.2 11Arabidopsis thaliana3E-17335465810 (0)C
Os05g12680.1 7Oryza sativa0371698329 (29)C
Os01g12720.1 7Oryza sativa7E-17734268830 (0)C
Os03g56470.1 7Oryza sativa1E-15635163780 (0)C
v1_GRMZM2G055678_P03 4a53Zea mays037168831 (1)_
GRMZM2G055678_P01 3.21Zea mays037168832 (2)_
v1_GRMZM2G055678_P01 4a53Zea mays037168831 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Adeno_E3_CR2(1) EphA2_TM(1) PK_Tyr_Ser-Thr(1) Pkinase(1) Pkinase_fungal(2) PRIMA
TargetP: Chloroplast (Class 4 C0.807; M0.014; S0.015; _0.510)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 509 aa (-cTP 501)
Molecular Weight 55.66 kDA(-cTP 54.83)
PI 5.89(-cTP 6.01)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help