PPDB

PPDB	The Plant Proteome Database

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AT1G52190.1 Major facilitator superfamily protein

Lab Annot.

peptide transporter
Mapman: 34.13 transport.peptides and oligopeptides

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G16180.1 11 Arabidopsis thaliana 0 588 78 89 0 (0) _
AT1G69870.1 11 Arabidopsis thaliana 2E-133 556 37 59 1 (1) _
AT1G68570.1 11 Arabidopsis thaliana 2E-128 592 37 59 0 (0) _
Os01g55610.1 7 Oryza sativa 2E-161 602 45 64 0 (0) _
Os01g55600.1 7 Oryza sativa 6E-152 552 43 64 0 (0) _
Os11g23890.1 7 Oryza sativa 9E-147 577 37 61 0 (0) M
Zm00001eb152390_P001 agpv5 Zea mays 1E-174 558 45 64 0 (0) _
GRMZM2G035790_P02 3.21 Zea mays 1E-174 558 45 64 0 (0) _
v1_GRMZM2G158807_P01 4a53 Zea mays 1E-152 570 41 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MFS_1(3) PIG-Y(3) PTR2(1)
TargetP:	Cytoplasm (Class 1 C0.066; M0.045; S0.016; _0.984)
Predotar:
Subcel. Location:
TM-HMM prediction:	10 TMs
Aramemnon:	11 TMs
TAT position:
Length	607 aa (-cTP 537)
Molecular Weight	66.90 kDA(-cTP )
PI	8.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data