PPDB

The Plant Proteome Database

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AT1G52100.1   Mannose-binding lectin superfamily protein

Lab Annot.
Mapman: 17.7.3 hormone metabolism.jasmonate.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52100.5 11Arabidopsis thaliana03621001000 (0)_
AT1G52100.2 11Arabidopsis thaliana03621001005 (4)_
AT1G52100.4 11Arabidopsis thaliana0362991000 (0)_
Os05g43240.3 7Oryza sativa5E-2745426400 (0)_
Os05g43240.1 7Oryza sativa5E-2745426400 (0)_
Os05g43240.2 7Oryza sativa5E-2745426400 (0)_
Zm00001eb369990_P001 agpv5Zea mays2E-2930232480 (0)_
v1_GRMZM2G170625_P01 4a53Zea mays1E-2232829440 (0)_
GRMZM2G170625_P02 3.21Zea mays3E-2232829440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Jacalin(3)
TargetP: Cytoplasm (Class 2 C0.077; M0.106; S0.123; _0.913)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 437 aa (-cTP 433)
Molecular Weight 47.66 kDA(-cTP )
PI 7.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
17432890(leaf total membranes)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help