PPDB

 The Plant Proteome Database

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AT1G52040.1   myrosinase-binding protein 1
Lab Annot. jacalin lectin family/myrosinase-binding protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location not plastid
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G52030.2 11Arabidopsis thaliana049464729 (9)_
AT1G52030.1 11Arabidopsis thaliana049464729 (9)_
AT1G52000.1 11Arabidopsis thaliana1E-1642997987168 (134)_
Os05g43240.1 7Oryza sativa4E-2032626440 (0)_
Os05g43240.2 7Oryza sativa4E-2032626440 (0)_
Os05g43240.3 7Oryza sativa4E-2032626440 (0)_
Zm00001eb369990_P001 agpv5Zea mays5E-3131027480 (0)_
GRMZM2G170625_P02 3.21Zea mays2E-2757926390 (0)_
Zm00001eb292320_P002 agpv5Zea mays2E-2757926390 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Jacalin(3) RRM_1(3)
TargetP: Cytoplasm (Class 1 C0.077; M0.102; S0.100; _0.948)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 462 aa (-cTP 452)
Molecular Weight 50.17 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1546Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1550Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1600Detail        [A. thaliana]  
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1629Detail       Rosettes [A. thaliana] Wild-type
1630Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1707Detail        [A. thaliana] sht1
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2319Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 14617066(Nuclear proteome)
15539469(vacuole)
15815986(Silique)
15815986(seedling)
15815986(Leaf)
18436743(specific to seeds)
20377703(flowers (COI1-regulated proteins))
20682788(root secretome)
19200160(flower-stage 12)
20118269(developing seeds)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

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