PPDB

PPDB	The Plant Proteome Database

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AT1G51930.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41450.1 11 Arabidopsis thaliana 2E-23 144 40 48 0 (0) S
AT5G41430.1 11 Arabidopsis thaliana 2E-15 140 37 47 0 (0) S
AT5G41440.1 11 Arabidopsis thaliana 1E-14 121 35 52 0 (0) S
Os08g43670.1 7 Oryza sativa 8E-13 45 55 71 0 (0) C
Os01g64620.1 7 Oryza sativa 3E-12 50 52 62 0 (0) M
Os05g39940.1 7 Oryza sativa 3E-12 52 51 59 0 (0) S
GRMZM2G390436_P01 3.21 Zea mays 4E-14 68 44 60 0 (0) _
Zm00001eb290630_P001 agpv5 Zea mays 4E-14 68 44 60 0 (0) _
v1_GRMZM2G390436_P01 4a53 Zea mays 4E-14 68 44 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DZR(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(2) RINGv(1) Rtf2(1) TerY_C(1
TargetP:	Secreted (Class 2 C0.029; M0.023; S0.923; _0.257)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	132 aa (-cTP 107)
Molecular Weight	14.93 kDA(-cTP )
PI	4.80(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data