PPDB

 The Plant Proteome Database

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AT1G51880.1   root hair specific 6
Lab Annot. root hair specific 6
Mapman: 30.2.99 signalling.receptor kinases.misc; 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G51880.2 11Arabidopsis thaliana08721001000 (0)_
AT1G51880.3 11Arabidopsis thaliana088099990 (0)_
AT1G51860.1 11Arabidopsis thaliana089274840 (0)S
Os05g44970.1 7Oryza sativa088741560 (0)S
Os05g44930.1 7Oryza sativa089441580 (0)S
Os05g44990.1 7Oryza sativa087440580 (0)M
Zm00001eb290700_P001 agpv5Zea mays090139570 (0)S
Zm00001eb232420_P001 agpv5Zea mays088840560 (0)S
Zm00001eb232420_P003 agpv5Zea mays088840560 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: EphA2_TM(1) LRR_1(2) LRR_4(2) LRR_8(1) Malectin_like(1) PK_Tyr_Ser-Thr(1) Pkinas
TargetP: Secreted (Class 1 C0.003; M0.012; S0.996; _0.113)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 872 aa (-cTP 855)
Molecular Weight 97.28 kDA(-cTP )
PI 6.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help