PPDB

The Plant Proteome Database

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AT1G51580.1   RNA-binding KH domain-containing protein

Lab Annot. RNA-binding KH domain-containing protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15270.3 11Arabidopsis thaliana6E-6343034520 (0)_
AT5G15270.2 11Arabidopsis thaliana1E-6243234521 (1)_
AT5G15270.1 11Arabidopsis thaliana1E-6243234521 (1)_
Os09g32300.1 7Oryza sativa2E-10855740550 (0)C
Os09g32300.3 7Oryza sativa5E-8340942550 (0)_
Os09g32300.2 7Oryza sativa5E-8340942550 (0)_
Zm00001eb102180_P002 agpv5Zea mays4E-9955639560 (0)C
GRMZM2G158884_P02 3.21Zea mays4E-9955639560 (0)C
v1_GRMZM2G158884_P01 4a53Zea mays1E-9053739550 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: KH_1(5) KH_2(5) KH_4(3) KH_5(3)
TargetP: Chloroplast (Class 5 C0.432; M0.252; S0.011; _0.266)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 621 aa (-cTP 609)
Molecular Weight 67.11 kDA(-cTP 65.78)
PI 5.74(-cTP 5.68)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help