PPDB

 The Plant Proteome Database

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AT1G51560.1   Pyridoxamine 5'-phosphate oxidase family protein
Lab Annot. Pyridoxamine 5'-phosphate oxidase protein
Mapman: 18.20* Co-factor and vitamine metabolism.vitamin b6
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21140.1 11Arabidopsis thaliana0391778472 (17)C
AT3G03890.2 11Arabidopsis thaliana6E-20211274978 (45)C
AT3G03890.1 11Arabidopsis thaliana6E-202112749112 (75)C
Os08g40570.1 7Oryza sativa4E-16526183910 (0)C
Os02g05500.1 7Oryza sativa1E-15426377880 (0)C
Os07g38620.1 7Oryza sativa7E-12109335711 (11)M
GRMZM2G074114_P02 3.21Zea mays1E-165264839118 (18)C
Zm00001eb035800_P002 agpv5Zea mays1E-16526483910 (0)C
v1_GRMZM2G074114_P02 4a53Zea mays1E-165264839115 (15)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF2470(1) Putative_PNPOx(1) Pyrid_oxidase_2(1)
TargetP: Chloroplast (Class 3 C0.783; M0.019; S0.033; _0.348)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 392 aa (-cTP 342)
Molecular Weight 43.58 kDA(-cTP 38.00)
PI 6.40(-cTP 5.79)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1175Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1176Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1177Detail       leaf [A. thaliana] co-IP OEC23 stromawild-type
1178Detail       leaf [A. thaliana] co-IP RH3 stromaclpr2-1
1179Detail       leaf [A. thaliana] co-IP ClpR2 stromaclpr2-1
1180Detail       leaf [A. thaliana] co-IP OEC23 stromaclpr2-1
1214Detail       leaf [A. thaliana] co-IP RH3 stromawild-type
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1635Detail       leaf [A. thaliana] Stroma stromaclpt1-2
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19334764(plasma membrane (cell culture))

Comparative Proteomics Data

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