PPDB

The Plant Proteome Database

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AT1G50575.1   Putative lysine decarboxylase family protein

Lab Annot. Putative lysine decarboxylase protein
Mapman: 13.2.3.5 amino acid metabolism.degradation.aspartate family.lysine
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g39010.1 7Oryza sativa3E-12322373859 (9)C
Zm00001eb049320_P001 agpv5Zea mays2E-11922270860 (0)_
GRMZM2G034503_P03 3.21Zea mays7E-8315670879 (0)_
GRMZM2G034503_P04 3.21Zea mays7E-8315670879 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LDcluster4(1) Lysine_decarbox(1)
TargetP: Chloroplast (Class 2 C0.882; M0.068; S0.009; _0.141)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 306 aa (-cTP 259) (-lTP 171)
Molecular Weight 33.97 kDA(-cTP 28.69)(-lTP 18.95)
PI 6.03(-cTP 5.62)(-lTP 5.182)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help