PPDB

The Plant Proteome Database

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AT1G50440.1   RING/FYVE/PHD zinc finger superfamily protein

Lab Annot. RING/FYVE/PHD zinc finger protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G50440.2 11Arabidopsis thaliana02501001000 (0)_
AT1G50440.3 11Arabidopsis thaliana02501001000 (0)_
AT1G50440.4 11Arabidopsis thaliana5E-1662211001000 (0)_
Os02g03950.3 7Oryza sativa2E-11824269800 (0)S
Os02g03950.1 7Oryza sativa2E-11824269800 (0)S
Os02g03950.2 7Oryza sativa2E-11824269800 (0)S
GRMZM2G072142_P01 3.21Zea mays5E-12025964770 (0)_
v1_GRMZM2G072142_P01 4a53Zea mays1E-5515856680 (0)_
Zm00001eb231340_P001 agpv5Zea mays4E-509877910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FANCL_C(1) RINGv(1) zf-RING_2(1)
TargetP: Cytoplasm (Class 2 C0.102; M0.136; S0.087; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 250 aa (-cTP 222)
Molecular Weight 28.78 kDA(-cTP )
PI 4.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help