PPDB

PPDB	The Plant Proteome Database

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AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein

Lab Annot.

Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G50410.3 11 Arabidopsis thaliana 0 981 100 100 0 (0) _
AT1G50410.2 11 Arabidopsis thaliana 0 981 100 100 0 (0) _
AT1G50410.4 11 Arabidopsis thaliana 0 881 99 99 0 (0) _
Os08g08220.2 7 Oryza sativa 0 855 56 68 0 (0) _
Os08g08220.1 7 Oryza sativa 0 855 56 68 0 (0) _
Os04g53720.1 7 Oryza sativa 0 867 54 67 0 (0) _
Zm00001eb369880_P002 agpv5 Zea mays 0 898 51 64 0 (0) _
GRMZM2G324781_P01 3.21 Zea mays 0 826 49 64 0 (0) _
v1_GRMZM2G324781_P01 4a53 Zea mays 0 783 45 60 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3246(1) DUF4611(2) Helicase_C(1) Prok-RING_4(1) SNF2_N(1) zf-ANAPC11(1) zf-C3
TargetP:	Cytoplasm (Class 4 C0.504; M0.068; S0.009; _0.720)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	981 aa (-cTP 905)
Molecular Weight	108.11 kDA(-cTP )
PI	6.84(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data