PPDB

PPDB	The Plant Proteome Database

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AT1G50300.1 TBP-associated factor 15

Lab Annot.

Mapman: 30.5 signalling.G-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G50300.2 11 Arabidopsis thaliana 0 282 100 100 0 (0) _
AT5G58470.2 11 Arabidopsis thaliana 2E-10 101 44 54 2 (2) _
AT5G58470.1 11 Arabidopsis thaliana 2E-10 101 44 54 2 (2) _
Os09g12800.1 7 Oryza sativa 8E-136 397 63 71 0 (0) _
Os07g19560.1 7 Oryza sativa 2E-129 397 60 70 0 (0) _
Os07g19560.2 7 Oryza sativa 3E-109 322 64 74 0 (0) _
Zm00001eb320850_P002 agpv5 Zea mays 3E-125 346 67 76 0 (0) _
v1_AC233865.1_FGP006 4a53 Zea mays 4E-125 346 67 76 0 (0) _
Zm00001eb320850_P001 agpv5 Zea mays 8E-125 346 67 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DZR_2(2) RRM_1(1) Rubredoxin(3) zf-4CXXC_R1(2) zf-RanBP(2)
TargetP:	Cytoplasm (Class 2 C0.094; M0.130; S0.170; _0.772)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	372 aa (-cTP 348)
Molecular Weight	41.28 kDA(-cTP )
PI	8.03(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data