PPDB

 The Plant Proteome Database

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AT1G50270.1   Pentatricopeptide repeat (PPR) superfamily protein
Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G13600.1 11Arabidopsis thaliana1E-12955736570 (0)_
AT2G29760.1 11Arabidopsis thaliana1E-12661635561 (0)C
AT2G22410.1 11Arabidopsis thaliana4E-12461834562 (2)M
Os10g26070.1 7Oryza sativa3E-12853839590 (0)M
Os04g41120.1 7Oryza sativa2E-12148940590 (0)M
Os10g30760.1 7Oryza sativa1E-11546040600 (0)M
GRMZM2G481373_P01 3.21Zea mays4E-12745242630 (0)C
v1_GRMZM2G481373_P01 4a53Zea mays4E-12745242630 (0)C
Zm00001eb424980_P001 agpv5Zea mays4E-12745242630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PPR(10) PPR_1(8) PPR_2(11) PPR_3(7) PPR_long(6) TPR_7(2)
TargetP: Cytoplasm (Class 3 C0.012; M0.027; S0.151; _0.695)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 596 aa (-cTP 549)
Molecular Weight 67.40 kDA(-cTP )
PI 8.35(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help