PPDB

PPDB	The Plant Proteome Database

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AT1G50260.1 N-terminal-transmembrane-C2 domain type 5.1

Lab Annot.

Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G50260.2 11 Arabidopsis thaliana 0 675 93 93 0 (0) C
AT3G19830.1 11 Arabidopsis thaliana 0 680 75 82 1 (1) C
AT3G19830.4 11 Arabidopsis thaliana 0 680 75 82 0 (0) C
Os02g58230.1 7 Oryza sativa 0 595 62 75 0 (0) C
Os02g58230.2 7 Oryza sativa 6E-144 423 56 70 0 (0) _
Os09g36770.3 7 Oryza sativa 3E-19 366 24 48 0 (0) S
v1_GRMZM2G152278_P01 4a53 Zea mays 0 585 63 76 0 (0) C
GRMZM2G152278_P01 3.21 Zea mays 0 585 63 76 0 (0) C
Zm00001eb190700_P001 agpv5 Zea mays 0 585 63 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C2(1) MMM1(2) SMP_LBD(1)
TargetP:	Chloroplast (Class 2 C0.798; M0.012; S0.053; _0.081)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	4 TMs
Aramemnon:	4 TMs
TAT position:
Length	675 aa (-cTP 608)
Molecular Weight	75.37 kDA(-cTP 67.75)
PI	6.26(-cTP 5.27)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data