PPDB

 The Plant Proteome Database

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AT1G49910.1   Transducin/WD40 repeat-like superfamily protein
Lab Annot.
Mapman: 31.2 cell.division
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19590.1 11Arabidopsis thaliana033688941 (0)C
AT1G69400.1 11Arabidopsis thaliana5E-6631137580 (0)_
AT1G80670.1 11Arabidopsis thaliana4E-6334135559 (2)C
Os03g33580.1 7Oryza sativa033083910 (0)C
Os07g39950.1 7Oryza sativa1E-17333268820 (0)_
Os03g33580.2 7Oryza sativa5E-13622082910 (0)C
GRMZM5G899300_P01 3.21Zea mays033082923 (3)C
v1_GRMZM2G089992_P01 4a53Zea mays033082922 (2)C
GRMZM5G899300_P02 3.21Zea mays5E-15424482922 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ANAPC4_WD40(5) eIF2A(2) PQQ_3(4) WD40(5)
TargetP: Cytoplasm (Class 5 C0.490; M0.089; S0.116; _0.570)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 339 aa (-cTP 316)
Molecular Weight 37.67 kDA(-cTP )
PI 8.00(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1763Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1764Detail       leaf [A. thaliana] total leaf tissue Col_0

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help