PPDB

PPDB	The Plant Proteome Database

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AT1G49900.1 C2H2 type zinc finger transcription factor family

Lab Annot.

C2H2 type zinc finger transcription factor family
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G19580.1 11 Arabidopsis thaliana 2E-26 133 48 61 0 (0) _
AT3G19580.2 11 Arabidopsis thaliana 2E-26 133 48 61 0 (0) _
AT1G27730.1 11 Arabidopsis thaliana 2E-18 100 48 62 0 (0) _
Os07g39960.1 7 Oryza sativa 4E-18 250 32 46 0 (0) C
Os03g32220.1 7 Oryza sativa 2E-16 135 37 51 0 (0) _
Os03g55540.1 7 Oryza sativa 1E-15 94 46 56 0 (0) _
Zm00001eb393490_P001 agpv5 Zea mays 7E-17 76 48 63 0 (0) _
GRMZM2G113860_P01 3.21 Zea mays 7E-17 76 48 63 0 (0) _
v1_GRMZM2G113860_P01 4a53 Zea mays 7E-17 76 48 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_2(4) Desulfoferrod_N(4) FAM75(2) zf-C2H2(4) zf-C2H2_4(4) zf-C2H2_6(5) zf-C2H2
TargetP:	Cytoplasm (Class 4 C0.043; M0.406; S0.077; _0.607)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	917 aa (-cTP 882)
Molecular Weight	102.70 kDA(-cTP )
PI	5.01(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data