PPDB

The Plant Proteome Database

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AT1G49850.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G15580.1 11Arabidopsis thaliana1E-1313834460 (0)M
AT1G60360.1 11Arabidopsis thaliana5E-118033500 (0)M
AT3G55530.1 11Arabidopsis thaliana1E-104252730 (0)_
Os03g10890.1 7Oryza sativa6E-2416635490 (0)_
Os09g17610.1 7Oryza sativa5E-124944690 (0)_
Os03g16570.3 7Oryza sativa8E-124652710 (0)S
GRMZM2G004422_P02 3.21Zea mays4E-2316636480 (0)M
v1_GRMZM2G004422_P02 4a53Zea mays4E-2316636480 (0)M
GRMZM5G863344_P03 3.21Zea mays4E-2316635500 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FANCL_C(1) PHD(1) SelP_N(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1
TargetP: Chloroplast (Class 5 C0.599; M0.410; S0.009; _0.110)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 250 aa (-cTP 247)
Molecular Weight 28.45 kDA(-cTP 28.13)
PI 8.70(-cTP 8.70)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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