PPDB

PPDB	The Plant Proteome Database

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AT1G49820.1 S-methyl-5-thioribose kinase

Lab Annot.

ATMTK; S-methyl-5-thioribose kinase
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os04g57400.1 7 Oryza sativa 0 412 71 87 0 (0) _
Os04g57410.1 7 Oryza sativa 0 412 70 86 0 (0) _
GRMZM2G464137_P02 3.21 Zea mays 0 420 70 85 34 (11) _
v1_GRMZM2G464137_P02 4a53 Zea mays 0 420 70 85 16 (16) _
Zm00001eb433310_P001 agpv5 Zea mays 0 420 70 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APH(1) APH_6_hur(1) Choline_kinase(1) Fructosamin_kin(1)
TargetP:	Cytoplasm (Class 2 C0.116; M0.136; S0.160; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	420 aa (-cTP 366)
Molecular Weight	48.07 kDA(-cTP )
PI	5.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2287	Detail								[A. thaliana]		Clp C1 WT
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data