PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G49770.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22760.2 11Arabidopsis thaliana3E-0912636520 (0)_
AT2G22760.1 11Arabidopsis thaliana4E-0912636520 (0)_
AT3G24140.1 11Arabidopsis thaliana2E-078434530 (0)_
Os04g35010.1 7Oryza sativa3E-3121732500 (0)_
Os02g34320.1 7Oryza sativa1E-146352760 (0)_
Os03g08930.1 7Oryza sativa3E-089934530 (0)_
Zm00001eb082900_P002 agpv5Zea mays4E-246771860 (0)C
v1_GRMZM2G147685_P01 4a53Zea mays4E-246771860 (0)C
GRMZM2G147685_P01 3.21Zea mays4E-246771860 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Allexi_40kDa(1) DUF3168(2) EPO_TPO(1) HLH(1)
TargetP: Cytoplasm (Class 3 C0.235; M0.091; S0.067; _0.807)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 308 aa (-cTP 305)
Molecular Weight 34.18 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help