PPDB

 The Plant Proteome Database

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AT1G49740.1   PLC-like phosphodiesterases superfamily protein
Lab Annot.
Mapman: 30.6 signalling.MAP kinases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19310.1 11Arabidopsis thaliana035571850 (0)S
AT4G36945.1 11Arabidopsis thaliana1E-15535959741 (0)S
AT5G67130.1 11Arabidopsis thaliana3E-13033054700 (0)S
Os04g35100.1 7Oryza sativa3E-16533464770 (0)S
Os08g01310.1 7Oryza sativa3E-150336587216 (16)S
Os09g02729.1 7Oryza sativa2E-13333054690 (0)S
Zm00001eb082840_P001 agpv5Zea mays1E-16733663780 (0)M
v1_GRMZM2G078650_P02 4a53Zea mays1E-16733663780 (0)M
GRMZM2G078650_P02 3.21Zea mays1E-16733663780 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GASA(1)
TargetP: Secreted (Class 1 C0.003; M0.059; S0.947; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 359 aa (-cTP 270)
Molecular Weight 39.83 kDA(-cTP )
PI 8.47(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
21533090(plasmodesmata-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help