PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G49530.1 geranylgeranyl pyrophosphate synthase 6

Lab Annot.

geranylgeranyl pyrophosphate synthase 6 (GGPS6)
Mapman: 16.1.2.10* secondary metabolism.isoprenoids.mevalonate pathway.geranylgeranyl pyrophosphate synthase

Curated Location

mitochondria (Pubmed: 10759500 )

TAIR curated location: mitochondrion10759500

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G20160.1 11 Arabidopsis thaliana 3E-162 336 69 81 0 (0) M
AT3G20160.2 11 Arabidopsis thaliana 6E-146 336 65 75 0 (0) M
AT4G36810.1 11 Arabidopsis thaliana 5E-140 322 62 79 238 (156) C
Os07g39270.1 7 Oryza sativa 7E-98 312 54 70 117 (117) M
Os07g39270.2 7 Oryza sativa 7E-98 312 54 70 117 (117) M
Os01g14630.1 7 Oryza sativa 7E-98 307 53 68 0 (0) C
Zm00001eb325560_P001 agpv5 Zea mays 3E-103 327 53 70 0 (0) M
AC194970.5_FGP001 3.21 Zea mays 4E-103 332 53 68 95 (40) C
Zm00001eb107690_P002 agpv5 Zea mays 4E-103 332 53 68 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	polyprenyl_synt(1)
TargetP:	Mitochondria (Class 2 C0.039; M0.825; S0.025; _0.080)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	336 aa (-cTP 311)
Molecular Weight	36.89 kDA(-cTP )
PI	7.61(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data