PPDB

The Plant Proteome Database

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AT1G49450.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18950.1 11Arabidopsis thaliana047874820 (0)_
AT4G34380.1 11Arabidopsis thaliana2E-16845756710 (0)_
AT2G26490.1 11Arabidopsis thaliana5E-16137960760 (0)_
Os03g52870.1 7Oryza sativa5E-15240857700 (0)_
Os12g40260.1 7Oryza sativa3E-13638155690 (0)_
Os03g42710.1 7Oryza sativa1E-12640550660 (0)C
Zm00001eb215260_P001 agpv5Zea mays3E-14240257710 (0)_
Zm00001eb056560_P001 agpv5Zea mays4E-14240957700 (0)_
GRMZM5G852097_P01 3.21Zea mays4E-14240957700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BBS2_Mid(3) Nup160(3) PQQ_3(6) WD40(7) WD40_2(3)
TargetP: Cytoplasm (Class 4 C0.096; M0.219; S0.014; _0.613)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 471 aa (-cTP 411)
Molecular Weight 52.50 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help