PPDB

The Plant Proteome Database

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AT1G49430.1   long-chain acyl-CoA synthetase 2

Lab Annot. LACS2 (LONG-CHAIN ACYL-COA SYNTHETASE 2)
Mapman: 11.1.9 lipid metabolism.FA synthesis and FA elongation.long chain fatty acid CoA ligase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G49430.2 11Arabidopsis thaliana05021001000 (0)_
AT1G64400.1 11Arabidopsis thaliana065553727 (7)_
AT4G23850.1 11Arabidopsis thaliana06655272213 (140)_
Os11g35400.1 7Oryza sativa0651647821 (21)_
Os11g35400.3 7Oryza sativa0651637719 (19)_
Os11g35400.2 7Oryza sativa0651637719 (19)_
Zm00001eb201940_P001 agpv5Zea mays066562760 (0)_
v1_GRMZM2G104847_P01 4a53Zea mays066562766 (6)_
GRMZM2G104847_P01 3.21Zea mays066562765 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AMP-binding(1) AMP-binding_C(1)
TargetP: Cytoplasm (Class 2 C0.119; M0.102; S0.197; _0.807)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 665 aa (-cTP 647)
Molecular Weight 74.39 kDA(-cTP )
PI 5.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2300Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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