PPDB

 The Plant Proteome Database

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AT1G49390.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Lab Annot.
Mapman: 16.8.4 secondary metabolism.flavonoids.flavonols
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20400.1 11Arabidopsis thaliana034883920 (0)_
AT1G49390.2 11Arabidopsis thaliana02691001000 (0)_
AT5G20550.1 11Arabidopsis thaliana034977860 (0)_
Os02g17940.3 7Oryza sativa2E-9134742600 (0)_
Os02g17940.2 7Oryza sativa2E-9134742600 (0)_
Os02g17940.6 7Oryza sativa2E-9134742600 (0)_
v1_GRMZM2G162158_P01 4a53Zea mays1E-9231045630 (0)_
Zm00001eb027940_P001 agpv5Zea mays1E-9231045630 (0)_
GRMZM2G162158_P01 3.21Zea mays1E-9231045630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2OG-FeII_Oxy(1) DIOX_N(1)
TargetP: Cytoplasm (Class 3 C0.080; M0.191; S0.089; _0.718)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 348 aa (-cTP 339)
Molecular Weight 39.61 kDA(-cTP )
PI 5.84(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help