PPDB

PPDB	The Plant Proteome Database

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AT1G49360.1 F-box family protein

Lab Annot.

F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G49360.5 11 Arabidopsis thaliana 0 481 95 95 0 (0) _
AT1G49360.2 11 Arabidopsis thaliana 0 378 100 100 0 (0) _
AT1G49360.3 11 Arabidopsis thaliana 0 378 100 100 0 (0) _
Os08g34860.1 7 Oryza sativa 1E-26 309 30 47 0 (0) _
Os08g34890.1 7 Oryza sativa 1E-22 316 27 45 0 (0) _
Os08g34820.1 7 Oryza sativa 5E-11 183 28 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5132(2) F-box(1) F-box-like(1) Oberon_cc(1) WHEP-TRS(1)
TargetP:	Cytoplasm (Class 4 C0.110; M0.117; S0.183; _0.417)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	481 aa (-cTP 477)
Molecular Weight	55.27 kDA(-cTP )
PI	6.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2150	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data