PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G49350.1   pfkB-like carbohydrate kinase family protein

Lab Annot. pfkB type carbohydrate kinase
Mapman: 3.5 minor CHO metabolism.others
Curated Location peroxisome (Pubmed: 21472859 21487095 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g09370.2 7Oryza sativa2E-11137848640 (0)M
Os05g09370.1 7Oryza sativa2E-11137848640 (0)M
Os05g09370.4 7Oryza sativa2E-11137848640 (0)M
GRMZM2G083068_P02 3.21Zea mays2E-10937746650 (0)M
Zm00001eb346550_P002 agpv5Zea mays2E-10937746650 (0)M
v1_GRMZM2G083068_P02 4a53Zea mays2E-10937746650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PfkB(2)
TargetP: Cytoplasm (Class 4 C0.309; M0.068; S0.117; _0.632)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 378 aa (-cTP 340)
Molecular Weight 40.32 kDA(-cTP )
PI 7.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help