PPDB

PPDB	The Plant Proteome Database

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AT1G49230.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G49200.1 11 Arabidopsis thaliana 1E-65 215 49 66 0 (0) C
AT1G49210.1 11 Arabidopsis thaliana 1E-63 210 50 68 0 (0) _
AT1G49220.1 11 Arabidopsis thaliana 5E-61 215 49 65 0 (0) _
Os04g34230.1 7 Oryza sativa 3E-49 197 45 61 0 (0) C
Os02g33720.1 7 Oryza sativa 1E-38 152 46 59 0 (0) _
Os12g02350.1 7 Oryza sativa 4E-34 125 46 64 0 (0) _
GRMZM2G059110_P01 3.21 Zea mays 3E-49 201 44 60 0 (0) _
v1_GRMZM2G059110_P01 4a53 Zea mays 3E-49 201 44 60 0 (0) _
v1_GRMZM2G451308_P01 4a53 Zea mays 4E-47 223 42 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF116(1) FANCL_C(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(2) zf-C3HC4_3(1) zf-rb
TargetP:	Cytoplasm (Class 4 C0.223; M0.061; S0.027; _0.542)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	219 aa (-cTP 137)
Molecular Weight	24.29 kDA(-cTP )
PI	7.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data