PPDB

PPDB	The Plant Proteome Database

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AT1G49220.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G49200.1 11 Arabidopsis thaliana 6E-138 252 76 82 0 (0) C
AT1G49210.1 11 Arabidopsis thaliana 2E-133 251 76 82 0 (0) _
AT3G18773.1 11 Arabidopsis thaliana 3E-98 216 66 77 0 (0) _
Os04g34230.1 7 Oryza sativa 3E-42 202 41 56 0 (0) C
Os11g02424.1 7 Oryza sativa 7E-32 141 41 61 0 (0) C
Os02g33720.1 7 Oryza sativa 6E-31 141 41 58 0 (0) _
GRMZM2G059110_P01 3.21 Zea mays 1E-43 166 43 59 0 (0) _
v1_GRMZM2G059110_P01 4a53 Zea mays 1E-43 166 43 59 0 (0) _
v1_GRMZM2G451308_P01 4a53 Zea mays 3E-33 220 36 50 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF116(1) FANCL_C(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-rb
TargetP:	Cytoplasm (Class 4 C0.106; M0.144; S0.022; _0.540)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	251 aa (-cTP 213)
Molecular Weight	27.81 kDA(-cTP )
PI	6.38(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data