PPDB

The Plant Proteome Database

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AT1G49140.1   NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6)

Lab Annot. Complex I subunit NDUFS6
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location
TAIR curated location: mitochondrion & mitochondrial membrane & NADH dehydrogenase complex (ubiquinone)12837548,14671022,16407270
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G49140.2 11Arabidopsis thaliana7E-761071001000 (0)_
AT3G18410.1 11Arabidopsis thaliana9E-7210497980 (0)_
AT3G18410.2 11Arabidopsis thaliana9E-7210497980 (0)_
Os10g42540.1 7Oryza sativa2E-4999708315 (15)_
v1_GRMZM2G173277_P01 4a53Zea mays2E-50100708318 (17)_
GRMZM2G173277_P01 3.21Zea mays2E-50100708328 (28)_
Zm00001eb224900_P001 agpv5Zea mays6E-509671850 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NDUFB10(1)
TargetP: Cytoplasm (Class 2 C0.123; M0.068; S0.231; _0.924)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 107 aa (-cTP 79)
Molecular Weight 12.53 kDA(-cTP )
PI 7.82(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1614Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
12837548(mitochondria-complex_I)
19546170(mature pollen grains)
20197505(mitochondria Complex I (leaf))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help