PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G48990.1   Oleosin family protein

Lab Annot. Oleosin protein
Mapman: 11.4 lipid metabolism.TAG synthesis
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G18570.1 11Arabidopsis thaliana4E-5617262761 (1)_
AT2G25890.1 11Arabidopsis thaliana1E-128137590 (0)_
AT2G25890.2 11Arabidopsis thaliana1E-128137590 (0)M
Os05g50110.1 7Oryza sativa2E-3018043600 (0)M
Os04g46200.1 7Oryza sativa7E-149832610 (0)_
Os01g45624.1 7Oryza sativa1E-0616035530 (0)_
v1_GRMZM2G096435_P02 4a53Zea mays1E-3113948712 (0)_
GRMZM2G096435_P01 3.21Zea mays3E-3014347692 (2)_
v1_GRMZM2G096435_P01 4a53Zea mays6E-3014347691 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5676(2) MGC-24(2) Oleosin(1) PepSY_TM(2) Phage_holin_3_6(1)
TargetP: Chloroplast (Class 4 C0.607; M0.269; S0.004; _0.116)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 169 aa (-cTP 95)
Molecular Weight 18.44 kDA(-cTP 10.38)
PI 9.89(-cTP 9.17)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help