PPDB

The Plant Proteome Database

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AT1G48950.1   C3HC zinc finger-like protein

Lab Annot. C3HC zinc finger-like
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17210.1 11Arabidopsis thaliana1E-5130736530 (0)C
Os01g42080.1 7Oryza sativa1E-9944842560 (0)_
Os07g05610.4 7Oryza sativa2E-60365375111 (11)C
Os07g05610.3 7Oryza sativa4E-60328405611 (11)C
Zm00001eb357790_P006 agpv5Zea mays7E-9545842550 (0)_
GRMZM2G044343_P01 3.21Zea mays5E-9445842550 (0)_
Zm00001eb357790_P001 agpv5Zea mays5E-9445842550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DM(4) Rsm1(4) zf-C3HC(2)
TargetP: Chloroplast (Class 3 C0.799; M0.045; S0.003; _0.333)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 594 aa (-cTP 524)
Molecular Weight 65.23 kDA(-cTP 57.57)
PI 8.10(-cTP 6.66)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help