PPDB

PPDB	The Plant Proteome Database

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AT1G48900.1 Signal recognition particle%2C SRP54 subunit protein

Lab Annot.

Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G49500.1 11 Arabidopsis thaliana 0 497 85 91 0 (0) _
AT1G48900.2 11 Arabidopsis thaliana 0 430 97 98 6 (2) _
AT1G15310.1 11 Arabidopsis thaliana 0 485 85 90 0 (0) _
Os01g56600.1 7 Oryza sativa 0 482 85 94 7 (7) _
Os05g43390.1 7 Oryza sativa 0 481 71 87 0 (0) _
Os11g05556.2 7 Oryza sativa 2E-68 435 31 52 18 (18) _
GRMZM2G038953_P02 3.21 Zea mays 0 482 79 89 3 (3) _
v1_GRMZM2G038953_P02 4a53 Zea mays 0 482 79 89 3 (3) _
Zm00001eb151790_P003 agpv5 Zea mays 0 482 79 89 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_17(1) AAA_19(1) AAA_22(2) AAA_24(1) AAA_30(1) AAA_33(1) APS_kinase(1)
TargetP:	Cytoplasm (Class 2 C0.075; M0.152; S0.058; _0.773)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	495 aa (-cTP 492)
Molecular Weight	54.78 kDA(-cTP )
PI	9.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1713	Detail								Rosettes [A. thaliana]	Thylakoids thylakoid membrane	k1k3
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data