PPDB

 The Plant Proteome Database

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AT1G48670.1   auxin-responsive GH3 family protein
Lab Annot. auxin-responsive GH3 protein
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G48660.2 11Arabidopsis thaliana057568780 (0)_
AT1G48660.1 11Arabidopsis thaliana0574687724 (23)_
AT1G48670.2 11Arabidopsis thaliana03721001000 (0)_
Os07g47490.2 7Oryza sativa3E-16457544610 (0)_
Os07g47490.1 7Oryza sativa3E-16457544610 (0)_
Os07g47490.3 7Oryza sativa6E-16356943610 (0)_
v1_GRMZM2G410567_P01 4a53Zea mays6E-15458443590 (0)_
Zm00001eb151250_P001 agpv5Zea mays3E-15357043580 (0)_
GRMZM2G410567_P01 3.21Zea mays2E-15258443590 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: GH3(2)
TargetP: Cytoplasm (Class 3 C0.156; M0.078; S0.219; _0.679)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 525 aa (-cTP 435)
Molecular Weight 59.14 kDA(-cTP )
PI 5.17(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1469Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help