PPDB

PPDB	The Plant Proteome Database

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AT1G48640.1 Transmembrane amino acid transporter family protein

Lab Annot.

Mapman: 34.3 transport.amino acids

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G40780.1 11 Arabidopsis thaliana 0 438 80 90 0 (0) _
AT5G40780.2 11 Arabidopsis thaliana 0 398 80 91 0 (0) M
AT5G40780.3 11 Arabidopsis thaliana 0 398 80 91 0 (0) M
Os08g03350.1 7 Oryza sativa 0 455 72 81 0 (0) _
Os12g14100.1 7 Oryza sativa 0 434 69 80 0 (0) _
Os05g14820.1 7 Oryza sativa 3E-178 433 64 76 0 (0) _
GRMZM2G149216_P01 3.21 Zea mays 0 431 69 81 0 (0) _
Zm00001eb412940_P003 agpv5 Zea mays 0 431 69 81 0 (0) _
Zm00001eb412940_P004 agpv5 Zea mays 0 431 69 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Aa_trans(1) DUF2583(1) OppC_N(1) Trp_Tyr_perm(2)
TargetP:	Cytoplasm (Class 2 C0.090; M0.222; S0.013; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction:	11 TMs
Aramemnon:	11 TMs
TAT position:
Length	453 aa (-cTP 439)
Molecular Weight	50.45 kDA(-cTP )
PI	7.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2247	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data