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AT1G48620.1
high mobility group A5
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| Lab Annot. |
histone H1/H5 family
Mapman: 28.1.3 DNA.synthesis/chromatin structure.histone |
| Curated Location |
nucleus
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
AT_hook(6) Linker_histone(1) |
| TargetP: |
Chloroplast (Class 3 C0.889; M0.026; S0.035; _0.398) |
| Predotar: |
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| Subcel. Location: |
Lumen |
| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
479 aa (-cTP 386) (-lTP 392) |
| Molecular Weight |
51.39 kDA(-cTP 41.44)(-lTP 42.08) |
| PI |
9.80(-cTP 10.13)(-lTP 9.990) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 106 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast thylakoid membrane | wild-type |
| 451 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 640 | Detail | | | | | | | | leaf [A. thaliana] | plastid nucleoid | wild-type |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1421 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1453 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1518 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1519 | Detail | | | | | | | | leaf [A. thaliana] | | wild-type |
| 1525 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1528 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1529 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 0 uM CAP | wild-type (rep. 1) |
| 1531 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | wild-type (rep. 1) |
| 1533 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | clps (rep. 1) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 1575 | Detail | | | | | | | | leaf [A. thaliana] | TiO2 thylakoid membrane | WT |
| 1627 | Detail | | | | | | | | Rosettes [A. thaliana] | total leaf tissue thylakoid + envelope | Wild-type |
| 1628 | Detail | | | | | | | | Rosettes [A. thaliana] | total leaf tissue thylakoid + envelope | k1xk3 |
| 1765 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids thylakoid membrane | Col-0 |
| 2009 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2011 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | opda1-2 |
| 2012 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2014 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2320 | Detail | | | | | | | | [A. thaliana] | Thylakoids plastoglobule | |
| 2321 | Detail | | | | | | | | leaf [A. thaliana] | | |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
| 2325 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | abc1k6 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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15028209(Total chloroplast)
15496452(nucleolus)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
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Comparative Proteomics Data
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