PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G48480.1   receptor-like kinase 1

Lab Annot. RKL1 (Receptor-like kinase 1); ATP binding / kinase/ protein serine/threonine kinase
Mapman: 30.2.3 signalling.receptor kinases.leucine rich repeat III; 30.1.1 signalling.in sugar and nutrient physiology
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17840.1 11Arabidopsis thaliana0659758422 (17)S
AT3G02880.1 11Arabidopsis thaliana0636526888 (80)S
AT5G16590.1 11Arabidopsis thaliana0633516726 (26)S
Os03g12250.1 7Oryza sativa0641546848 (48)S
Os03g50450.1 7Oryza sativa063353675 (5)M
Os04g38910.1 7Oryza sativa062748650 (0)S
Zm00001eb216290_P001 agpv5Zea mays065251660 (0)M
GRMZM2G150448_P01 3.21Zea mays0652516610 (7)_
Zm00001eb399890_P003 agpv5Zea mays066351660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adeno_E3_CR2(1) Amnionless(1) CYYR1(1) DUF2207(1) DUF2905(1) DUF4690(1) EphA2_TM
TargetP: Secreted (Class 2 C0.086; M0.027; S0.763; _0.005)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 655 aa (-cTP 587)
Molecular Weight 71.13 kDA(-cTP )
PI 8.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help