PPDB

PPDB	The Plant Proteome Database

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AT1G48470.1 glutamine synthetase 1%3B5

Lab Annot.

glutamate-ammonia ligase/glutamine synthetase 1,5 - GLN1;5
Mapman: 12.2.2 N-metabolism.ammonia metabolism.glutamine synthase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17820.1 11 Arabidopsis thaliana 0 352 83 92 182 (156) _
AT5G16570.1 11 Arabidopsis thaliana 0 352 80 92 16 (10) _
AT5G37600.1 11 Arabidopsis thaliana 0 352 79 92 181 (94) _
Os02g50240.1 7 Oryza sativa 0 350 80 92 29 (29) _
Os03g50490.1 7 Oryza sativa 0 353 78 90 0 (0) _
Os03g12290.1 7 Oryza sativa 0 350 77 90 2 (2) _
Zm00001eb190340_P001 agpv5 Zea mays 0 350 80 92 0 (0) _
GRMZM2G036464_P01 3.21 Zea mays 0 350 80 92 50 (50) _
v1_GRMZM2G036464_P01 4a53 Zea mays 0 350 80 92 49 (48) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Gln-synt_C(1) Gln-synt_N(1)
TargetP:	Cytoplasm (Class 2 C0.138; M0.069; S0.110; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	353 aa (-cTP 292)
Molecular Weight	38.91 kDA(-cTP )
PI	6.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1455	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1457	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1458	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 1)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
17216043(leaf)
19508356(mature pollen grains and pollen tubes)
21533090(plasmodesmata-crude)

Comparative Proteomics Data