PPDB

PPDB	The Plant Proteome Database

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AT1G48370.1 YELLOW STRIPE like 8

Lab Annot.

YELLOW STRIPE like 8
Mapman: 34.13 transport.peptides and oligopeptides

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G17650.1 11 Arabidopsis thaliana 0 725 84 91 0 (0) _
AT3G17650.2 11 Arabidopsis thaliana 0 725 84 91 0 (0) _
AT1G48370.2 11 Arabidopsis thaliana 0 561 100 100 0 (0) _
Os04g57840.1 7 Oryza sativa 0 682 67 81 0 (0) _
Os04g44320.1 7 Oryza sativa 0 671 69 82 0 (0) _
Os02g42220.1 7 Oryza sativa 0 675 67 82 2 (2) _
GRMZM5G893444_P01 3.21 Zea mays 0 677 67 82 0 (0) _
Zm00001eb426920_P004 agpv5 Zea mays 0 677 67 82 0 (0) _
v1_GRMZM2G099390_P01 4a53 Zea mays 0 677 67 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	OPT(1)
TargetP:	Cytoplasm (Class 2 C0.128; M0.226; S0.045; _0.848)
Predotar:
Subcel. Location:
TM-HMM prediction:	14 TMs
Aramemnon:	15 TMs
TAT position:
Length	724 aa (-cTP 709)
Molecular Weight	80.11 kDA(-cTP )
PI	8.82(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data