PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G48310.1 chromatin remodeling factor18

Lab Annot.

chromatin remodeling factor18
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48310.2 11 Arabidopsis thaliana 0 678 99 99 0 (0) _
AT1G48310.3 11 Arabidopsis thaliana 0 615 99 100 0 (0) _
AT1G48310.4 11 Arabidopsis thaliana 0 505 100 100 0 (0) _
Os07g44210.1 7 Oryza sativa 0 690 63 78 0 (0) M
Os07g40730.3 7 Oryza sativa 2E-75 522 32 52 0 (0) M
Os07g40730.1 7 Oryza sativa 2E-75 522 32 52 0 (0) M
GRMZM2G126774_P02 3.21 Zea mays 0 678 55 70 0 (0) _
v1_GRMZM2G126774_P02 4a53 Zea mays 0 678 55 70 0 (0) _
GRMZM2G126774_P03 3.21 Zea mays 0 566 56 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) HARP(1) Helicase_C(1) ResIII(2) SNF2_N(1) TniB(4)
TargetP:	Cytoplasm (Class 3 C0.219; M0.068; S0.015; _0.749)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	673 aa (-cTP 611)
Molecular Weight	75.07 kDA(-cTP )
PI	7.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data