PPDB

The Plant Proteome Database

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AT1G48310.1   chromatin remodeling factor18

Lab Annot. chromatin remodeling factor18
Mapman: 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G48310.2 11Arabidopsis thaliana067899990 (0)_
AT1G48310.3 11Arabidopsis thaliana0615991000 (0)_
AT1G48310.4 11Arabidopsis thaliana05051001000 (0)_
Os07g44210.1 7Oryza sativa069063780 (0)M
Os07g40730.3 7Oryza sativa2E-7552232520 (0)M
Os07g40730.1 7Oryza sativa2E-7552232520 (0)M
GRMZM2G126774_P02 3.21Zea mays067855700 (0)_
v1_GRMZM2G126774_P02 4a53Zea mays067855700 (0)_
GRMZM2G126774_P03 3.21Zea mays056656730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEAD(2) HARP(1) Helicase_C(1) ResIII(2) SNF2_N(1) TniB(4)
TargetP: Cytoplasm (Class 3 C0.219; M0.068; S0.015; _0.749)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 673 aa (-cTP 611)
Molecular Weight 75.07 kDA(-cTP )
PI 7.99(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
874Detail       leaf [A. thaliana] chloroplast stromawild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help