PPDB

The Plant Proteome Database

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AT1G48160.1   signal recognition particle 19 kDa protein%2C putative / SRP19

Lab Annot. signal recognition particle 19 kDa protein, putative / SRP19, putative
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G48160.2 11Arabidopsis thaliana5E-1051451001000 (0)_
Os06g23430.2 7Oryza sativa1E-5713662772 (2)_
Os06g23430.1 7Oryza sativa1E-5713662772 (2)_
Zm00001eb066670_P004 agpv5Zea mays2E-5510869870 (0)_
v1_GRMZM2G077744_P02 4a53Zea mays2E-5510869870 (0)_
v1_GRMZM2G077744_P01 4a53Zea mays2E-5510869870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RBM39linker(1) SRP19(1)
TargetP: Cytoplasm (Class 2 C0.089; M0.149; S0.146; _0.757)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 145 aa (-cTP 127)
Molecular Weight 16.27 kDA(-cTP )
PI 10.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19714877(interactomes 14-3-3 complexes (cell culture))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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