PPDB

 The Plant Proteome Database

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AT1G48130.1   1-cysteine peroxiredoxin 1
Lab Annot. 1-Cys peroxiredoxin (1-Cys Prx)
Mapman: 21.5 redox.periredoxins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G06290.1 11Arabidopsis thaliana1E-241763051652 (537)C
AT3G11630.1 11Arabidopsis thaliana9E-2417631501484 (1108)C
AT5G06290.2 11Arabidopsis thaliana2E-2115631500 (0)C
Os07g44430.1 7Oryza sativa3E-11322269830 (0)_
Os07g44440.1 7Oryza sativa5E-10622165790 (0)_
Os02g33450.1 7Oryza sativa4E-23174305087 (87)C
GRMZM2G129761_P01 3.21Zea mays5E-11222964790 (0)M
v1_GRMZM2G129761_P01 4a53Zea mays5E-11222964790 (0)M
Zm00001eb328770_P001 agpv5Zea mays1E-11122964790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 1-cysPrx_C(1) AhpC-TSA(1) AhpC-TSA_2(1) ISPD_C(1) Redoxin(1)
TargetP: Cytoplasm (Class 2 C0.126; M0.139; S0.091; _0.905)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 216 aa (-cTP 165)
Molecular Weight 24.08 kDA(-cTP )
PI 6.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2291Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
18436743(specific to roots)
20118269(developing seeds)
19562800(oil body mature seeds (Brassica napus))
20702726(mature seeds)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help