PPDB

PPDB	The Plant Proteome Database

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AT1G48090.1 calcium-dependent lipid-binding family protein

Lab Annot.

C2 domain-containing protein
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48090.2 11 Arabidopsis thaliana 0 4173 99 99 2 (2) S
AT1G48090.3 11 Arabidopsis thaliana 0 4173 98 98 0 (0) _
AT1G48090.5 11 Arabidopsis thaliana 0 4146 99 99 0 (0) _
Os02g27110.1 7 Oryza sativa 0 1857 52 68 0 (0) M
Os02g27130.1 7 Oryza sativa 0 556 56 71 0 (0) _
Os10g41560.1 7 Oryza sativa 6E-98 510 37 58 0 (0) _
GRMZM2G057402_P02 3.21 Zea mays 0 1408 53 70 0 (0) _
Zm00001eb203090_P002 agpv5 Zea mays 0 855 61 76 0 (0) _
Zm00001eb203090_P001 agpv5 Zea mays 0 855 61 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATG_C(1) C2(1) Chorein_N(1) SHR-BD(2) VPS13(2) VPS13_C(3) VPS13_mid_rpt(4) Vps62
TargetP:	Secreted (Class 2 C0.009; M0.062; S0.864; _0.212)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	4146 aa (-cTP 4084)
Molecular Weight	462.01 kDA(-cTP )
PI	6.04(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1542	Detail								leaf [A. thaliana]		wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
15276459(trichomes)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data