PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G47960.1   cell wall / vacuolar inhibitor of fructosidase 1

Lab Annot. C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1); pectinesterase inhibitor
Mapman: 26.16 misc.myrosinases-lectin-jacalin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G47960.2 11Arabidopsis thaliana1E-1141611001000 (0)S
AT3G17140.1 11Arabidopsis thaliana4E-329660750 (0)S
AT3G17150.1 11Arabidopsis thaliana7E-1317030440 (0)S
Os01g20970.1 7Oryza sativa3E-0812228500 (0)S
GRMZM2G096897_P01 3.21Zea mays8E-1014725522 (2)S
v1_GRMZM2G096897_P01 4a53Zea mays8E-1014725522 (2)S
Zm00001eb340180_P001 agpv5Zea mays8E-1014725520 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BAR(2) PMEI(1)
TargetP: Secreted (Class 1 C0.004; M0.015; S0.991; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 205 aa (-cTP 193)
Molecular Weight 22.33 kDA(-cTP )
PI 8.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
411Detail        [A. thaliana] QConCat (E. coli) none (E. coli)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15593128(Cell Wall proteome)
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help