PPDB

PPDB	The Plant Proteome Database

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AT1G47870.1 winged-helix DNA-binding transcription factor family protein

Lab Annot.

Mapman: 27.3.18 RNA.regulation of transcription.E2F/DP transcription factor family

Curated Location

TAIR curated location: nucleolus & nucleus11891240,15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G47870.2 11 Arabidopsis thaliana 0 396 99 99 0 (0) C
AT5G22220.3 11 Arabidopsis thaliana 1E-76 333 43 58 0 (0) _
AT5G22220.2 11 Arabidopsis thaliana 1E-76 333 43 58 0 (0) _
Os02g33430.2 7 Oryza sativa 2E-73 322 44 58 0 (0) _
Os12g06200.2 7 Oryza sativa 4E-73 275 48 65 0 (0) M
Os02g33430.1 7 Oryza sativa 5E-73 322 44 58 0 (0) M
Zm00001eb407120_P004 agpv5 Zea mays 4E-71 303 44 62 0 (0) M
Zm00001eb407120_P003 agpv5 Zea mays 1E-70 303 44 62 0 (0) _
Zm00001eb407120_P001 agpv5 Zea mays 2E-70 303 44 62 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	betaPIX_CC(1) CLZ(2) E2F_CC-MB(1) E2F_TDP(2) HAUS5(1) RNA_pol_N(1) TrmB(1)
TargetP:	Chloroplast (Class 3 C0.837; M0.066; S0.004; _0.249)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	396 aa (-cTP 345)
Molecular Weight	44.49 kDA(-cTP 38.87)
PI	5.74(-cTP 5.52)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data