PPDB

The Plant Proteome Database

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AT1G47750.1   peroxin 11A

Lab Annot. PEX11A
Mapman: 35.1 not assigned.no ontology
Curated Location peroxisome (Pubmed: 16636080 17220199 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G47430.1 11Arabidopsis thaliana2E-23240315131 (27)_
AT2G45740.2 11Arabidopsis thaliana1E-082272447105 (96)S
AT2G45740.1 11Arabidopsis thaliana1E-082272447105 (96)S
Os03g19010.1 7Oryza sativa8E-7623751720 (0)_
Os03g19000.1 7Oryza sativa4E-6325043650 (0)_
Os04g45210.1 7Oryza sativa3E-2823731558 (8)_
GRMZM2G036086_P01 3.21Zea mays1E-7923652700 (0)_
Zm00001eb014180_P001 agpv5Zea mays1E-7923652700 (0)_
v1_GRMZM2G036086_P01 4a53Zea mays1E-7923652701 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PEX11(1)
TargetP: Cytoplasm (Class 2 C0.032; M0.147; S0.016; _0.941)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 248 aa (-cTP 188)
Molecular Weight 27.68 kDA(-cTP )
PI 9.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19329564(peroxisomes (leaf))
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help